wlandau crew.cluster · Discussions · GitHub

Discussions

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crew_controller_slurm returning FAILED jobs when pipeline succeeds

kyle-messier started Feb 9, 2026 in General

6
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SLURM + apptainer communication issues

kyle-messier started Oct 14, 2025 in General · Closed

4
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Segfault with crew_controller_slurm()

barnabasharris asked Jan 13, 2026 in Q&A · Closed · Unanswered

2
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SLURM job array support?
type: new feature
tdhock asked May 21, 2025 in Q&A · Closed · Answered

23
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Optionally deprecate some batch script directives (PBS)

AdamChapnik1 asked Jul 28, 2025 in Q&A · Unanswered

1
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Is memory usage in parent process expected to climb when using SLURM crew?

Shians asked Jul 8, 2025 in Q&A · Unanswered

6
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Incremental resources controller

stemangiola started Jul 1, 2025 in General

5
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How do I set the number of tasks / workers using crew_controller_slurm() or crew_options_slurm()

barnabasharris asked Mar 27, 2025 in Q&A · Closed · Unanswered

2
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Executing workers in singularity image

brendevan started Apr 25, 2024 in General · Closed

6
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Issue running with Singularity on SLURM
type: trouble
drejom announced Jan 10, 2024 in Announcements · Closed

9
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Why does crew::crew_worker(... show up in logs only *sometimes*?

Aariq asked Dec 18, 2024 in Q&A · Closed · Unanswered

8
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Log resource usage with sacct

Aariq started Oct 11, 2024 in Ideas · Closed

1
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use crew_controller_slurm for remote server

stemangiola asked Jul 12, 2023 in Q&A · Closed · Unanswered

6
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Performance bottlenecks with crew_controller_local() and ~32k dynamic branches

philiporlando asked Oct 16, 2024 in Q&A · Closed · Unanswered

2
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I can test things on slurm if that help

statquant started May 19, 2024 in General · Closed

4
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How to configure a routine containerized slurm cluster setup?

kcandrews asked Jan 19, 2024 in Q&A · Closed · Unanswered

3
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crew_controller_sge() does not work in newer version

psychelzh started Feb 21, 2024 in General · Closed

4
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some workers fail on startup

brendanf asked Feb 20, 2024 in Q&A · Closed · Unanswered

9
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SLURM job fails from controller running targets pipeline - Timed out

colebrookson asked Feb 2, 2024 in Q&A · Closed · Unanswered

6
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variable worker-cpu relationships (for targets)

colebrookson asked Jan 14, 2024 in Q&A · Closed · Answered

1
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AWS Ec2 launcher

jdavis-EliLilly started Jul 13, 2023 in Show and tell · Closed

3
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Spread the load acros two mirrored remote SLURM systems
type: new feature
stemangiola asked Dec 11, 2023 in Q&A · Closed · Unanswered

4
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Additional arguments for slurm launcher

nviets asked Oct 13, 2023 in Q&A · Closed · Unanswered

4
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crew_controller_slurm seems to work

kendonB started Aug 8, 2023 in General · Closed

1
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return average cpu usage , memory, and io, similarly to nextflow report
type: new feature
stemangiola announced Jul 12, 2023 in Announcements · Closed

6