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New module baysor#11790

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khersameesh24 wants to merge 12 commits into
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new-module-baysor
Open

New module baysor#11790
khersameesh24 wants to merge 12 commits into
masterfrom
new-module-baysor

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@khersameesh24 khersameesh24 commented May 29, 2026

Added new module baysor

  • container image is from quay.io until a new image is available via wave containers (bioconda package available but returns a faulty cached image on seqera containers)
  • output is non-deterministic and only checks for the presence of output files in nf-tests

Closes #11785 #7270

PR checklist

  • [✅] This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • [✅] If you've added a new tool - have you followed the module conventions in the contribution docs
  • [✅] If necessary, include test data in your PR.
  • [✅] Remove all TODO statements.
  • [✅] Broadcast software version numbers to topic: versions - See version_topics
  • [✅] Follow the naming conventions.
  • [✅] Follow the parameters requirements.
  • [✅] Follow the input/output options guidelines.
  • [✅] Add a resource label
  • [✅] Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • [✅] nf-core modules test <MODULE> --profile docker
      • [✅] nf-core modules test <MODULE> --profile singularity
      • [✅] nf-core modules test <MODULE> --profile conda
    • For subworkflows:
      • nf-core subworkflows test <SUBWORKFLOW> --profile docker
      • nf-core subworkflows test <SUBWORKFLOW> --profile singularity
      • nf-core subworkflows test <SUBWORKFLOW> --profile conda

@khersameesh24 khersameesh24 requested a review from SPPearce May 29, 2026 10:32
@khersameesh24 khersameesh24 enabled auto-merge May 29, 2026 13:49
@khersameesh24 khersameesh24 requested a review from heylf May 30, 2026 15:06
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new module: baysor

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