Skip to content

Actions: nf-core/epitopeprediction

Actions

Fix linting from a comment

Actions

Loading...
Loading

Show workflow options

Create status badge

Loading
fix_linting.yml
73 workflow runs
73 workflow runs

Filter by Event

⌥ + click/return to exclude

Filter by Status

⌥ + click/return to exclude

Filter by Branch

⌥ + click/return to exclude

Filter by Actor

⌥ + click/return to exclude
Add allele chunking and pan-HLA prediction support Fix linting from a comment #73: Issue comment #341 (comment) created by nf-core-bot
1s
1s
fix: VARIANT_SPLIT transpose compat with Nextflow 25.x Fix linting from a comment #72: Issue comment #345 (comment) created by jonasscheid
1s
1s
fix: VARIANT_SPLIT transpose compat with Nextflow 25.x Fix linting from a comment #71: Issue comment #344 (comment) created by axelwalter
1s
1s
Fix missing wildtype sequences in FASTA output Fix linting from a comment #70: Issue comment #342 (comment) created by jonasscheid
2s
2s
EPYTOPE_VARIANT_PREDICTION fails with pandas ValueError: Ensembl BioMart API returns 1 column instead of expected 3 Fix linting from a comment #69: Issue comment #337 (comment) created by imrank11
1s
1s
Add MixMHCpred and MixMHCIIpred binding predictors Fix linting from a comment #68: Issue comment #338 (comment) created by nf-core-bot
1s
1s
EPYTOPE_VARIANT_PREDICTION fails with pandas ValueError: Ensembl BioMart API returns 1 column instead of expected 3 Fix linting from a comment #67: Issue comment #337 (comment) created by jonasscheid
1s
1s
Add animated metro map to README Fix linting from a comment #66: Issue comment #333 (comment) created by nf-core-bot
1s
1s
Fix Nextflow strict syntax lint errors Fix linting from a comment #65: Issue comment #331 (comment) created by jonasscheid
1s
1s
Fix Nextflow strict syntax lint errors Fix linting from a comment #64: Issue comment #331 (comment) created by nf-core-bot
10s
10s
feat: Extract protein IDs from VCF annotations and add genome reference mapping Fix linting from a comment #63: Issue comment #330 (comment) created by nf-core-bot
1s
1s
Add optional use_ba_rank param to prefer BA_Rank as rank metric in output of netmhc predictions Fix linting from a comment #62: Issue comment #327 (comment) created by nf-core-bot
2s
2s
Add ensembl_dataset parameter to support non-human species Fix linting from a comment #61: Issue comment #329 (comment) created by nf-core-bot
1s
1s
Refactor netmhcpan CI to use shared nf-test action Fix linting from a comment #60: Issue comment #328 (comment) created by nf-core-bot
2s
2s
Add optional flag to use BA_rank as rank metric in output Fix linting from a comment #59: Issue comment #325 (comment) created by Chiyun-Lee
2s
2s
Add optional use_ba_rank param to prefer BA_Rank as rank metric in output of netmhc predictions Fix linting from a comment #58: Issue comment #327 (comment) created by jonasscheid
42s
42s
Add optional flag to use BA_rank as rank metric in output Fix linting from a comment #57: Issue comment #325 (comment) created by jonasscheid
2s
2s
Add optional flag to use BA_rank as rank metric in output Fix linting from a comment #56: Issue comment #325 (comment) created by jonasscheid
1s
1s
Add optional flag to use BA_rank as rank metric in output Fix linting from a comment #55: Issue comment #325 (comment) created by Chiyun-Lee
1s
1s
Add optional flag to use BA_rank as rank metric in output Fix linting from a comment #54: Issue comment #325 (comment) created by jonasscheid
1s
1s
suggested change to make rank representative of BA (issue #325) Fix linting from a comment #53: Issue comment #326 (comment) created by Chiyun-Lee
1s
1s
Add optional flag to use BA_rank as rank metric in output Fix linting from a comment #52: Issue comment #325 (comment) created by Chiyun-Lee
1m 10s
1m 10s
Add optional flag to use BA_rank as rank metric in output Fix linting from a comment #51: Issue comment #325 (comment) created by jonasscheid
1s
1s
Add optional flag to use BA_rank as rank metric in output Fix linting from a comment #50: Issue comment #325 (comment) created by Chiyun-Lee
1s
1s
Add optional flag to use BA_rank as rank metric in output Fix linting from a comment #49: Issue comment #325 (comment) created by jonasscheid
1s
1s