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Venerating the Machine Spirit
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Venerating the Machine Spirit

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harveydevereux/README.md

Hi, I'm Harvey

I did a PhD student, then a Post-doc. I like to build neat applications and automations.

I love Rust, but mainly work in Fortran (I know), Python, and C++ professionally.

I work on various projects in the computational materials science ecosystem, and loads of small and large hobby automation projects.

I am also on Gitlab

Some fun things you might like

Materials science

  • Since 2023, I've mainly worked on DL_POLY (Classical Molecular Dynamics) and its Python meta package dlpoly-py, on a Postdoc at Queen Mary University of London. Including DL_POLY tools and workflows.
  • I also contribute to janus_core - a Python/CLI toolbox for machine-learned interatomic potentials.
Languages and frameworks I use
  • C++, Fortran, Rust, shell (bash), Python, Julia, Kotlin, Lua, Javascript (+html/css), C
  • MPI, CMake, HPC Schedulers (SLURM/UGE), OpenGL, Vulkan, Android (Jetpack Compose, Kotlin, C++ NDK), CUDA (C++, Fortran), OpenAcc, GCloud, AWS (lambda mostly), git, github/gitlab

Research (talks/ Posters/ Papers/ Etc.)

Posters
Events
  • Co-organiser DL_POLY Workshop 10th and 11th January 2024
Talks

Papers

  • Devereux, H.L., Cockrell, C., Elena, A.M., Bush, I., Chalk, A.B., Madge, J., Scivetti, I., Wilkins, J.S., Todorov, I.T., Smith, W. and Trachenko, K., 2026. DL_POLY 5: Calculation of system properties on the fly for very large systems via massive parallelism. Computer Physics Communications, p.110128. (Open Access), doi: https://doi.org/10.1016/j.cpc.2026.110128

  • Cockrell, C., Withington, M.A., Devereux, H., Elena, A., Todorov, I., Liu, Z.K., Shang, S., McCloy, J., Bingham, P. and Trachenko, K., 2024. Thermodynamics and transport in molten chloride salts and their mixtures. Physical Chemistry Chemical Physics. arXiv post-print: https://arxiv.org/abs/2501.01971v1, doi: https://doi.org/10.1039/D4CP04180A

  • Harvey L. Devereux, Margaret-Ann Withington, Cillian Cockrell, Kostya Trachenko, Alin Marin Elena, Performance of the MACE-MP-0 potential for calculating viscosity in LiF molten salt, 2024 arXiv pre-print: https://arxiv.org/abs/2410.23679.

  • C. Cockrell, M. Withington, H. L. Devereux, A. M. Elena, I. T. Todorov, Z. K. Liu, S. L. Shang, J. S. McCloy, P. A. Bingham, K. Trachenko, Thermal conductivity and thermal diffusivity of molten salts: insights from molecular dynamics simulations and fundamental bounds, 2024 arXiv pre-print: https://arxiv.org/abs/2409.03775.

  • Withington, M., Devereux, H.L., Cockrell, C., Elena, A.M., Todorov, I.T., Liu, Z.K., Shang, S.L., McCloy, J.S., Bingham, P.A. and Trachenko, K., 2024. Viscosity bounds in liquids with different structure and bonding types. Physical Review B, 109(9), p.094205. https://doi.org/10.1103/PhysRevB.109. (Open Access)

  • Devereux, HL. and Turner, MS., 2023. Environmental path-entropy and collective motion. Physical Review Letters, 130(16), p.168201. https://doi.org/10.1103/PhysRevLett.130.168201 (Open Access)

  • Devereux HL, Twomey CR, Turner MS, Thutupalli S. 2021 Whirligig beetles as corralled active Brownian particles. J. R. Soc. Interface 18: 20210114. https://doi.org/10.1098/rsif.2021.0114 (arXiv pre-print: https://arxiv.org/abs/2104.03080)

Funding

  • Material Chemistry Consortium (MCC) compute time on ARCHER2, the UK National Supercomputing Service.

  • EPSRC and MRC Centre for Doctoral Training in Mathematics for Real-World Systems, EP/L015374/1 (PhD Studentship 2017-2021) Inc. 3-month fully-funded coronavirus extension.

  • Warwick-Turing AI Research Strategy Scheme Postdoc

  • HPC compute time: Joint Usage/Research Center for Interdisciplinary Large-scale Information Infrastructures” and ”High Performance Computing Infrastructure” in Japan Project ID: jh220054

I'm also on Github...

https://github.com/harveydevereux - mostly for my PhD work (2017 - 2023)

Pinned Loading

  1. stfc/janus-core stfc/janus-core Public

    Tools for machine learnt interatomic potentials

    Python 44 17

  2. Consensus Consensus Public

    Implements consensus algorithms on fixed and time varying graphs

    Python 20 13

  3. AlphaShapes.jl AlphaShapes.jl Public

    Basic implementation of alpha shapes

    Julia 8 3

  4. dominusmi/Julia-Machine-Learning-Review dominusmi/Julia-Machine-Learning-Review Public

    Jupyter Notebook 17 4

  5. warwick-hpc-repohack warwick-hpc-repohack Public

    MATLAB

  6. FortranOpenGL FortranOpenGL Public

    Fortran