django-mogi

Metabolomics organisation with Galaxy and ISA.

Used to create DMAdb, see ReadTheDocs (DMAdb) for documentation.

Previous documentation can be found at ReadTheDocs (legacy).

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This package is no longer updated on PyPI.

For current code and updates, use this GitHub repository.

Quick start

1. Add "mogi" and django application dependencies to your INSTALLED_APPS setting like this (mogi should come before galaxy and gfiles):

   INSTALLED_APPS = [
       ...
       'mogi',
       'galaxy',
       'gfiles',
   
       'django_tables2',
       'django_tables2_column_shifter',
       'django_filters',
       'bootstrap3',
       'django_sb_admin',
       'dal',
       'dal_select2',
   ]
   

2. Include the URLconf in your project urls.py like this:

   url(r'^', include('gfiles.urls')),
   url('mogi/', include('mogi.urls')),
   url('mbrowse/', include('mbrowse.urls')),
   url('misa/', include('misa.urls')),
   url('galaxy/', include('galaxy.urls')),
   

3. Run python manage.py migrate to create the mogi models.

4. Start the development server and visit http://127.0.0.1:8000/