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@GoekeLab

Göke Lab

Computational Transcriptomics - Third Generation Sequencing

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  1. bambu bambu Public

    Reference-guided transcript discovery and quantification for long read RNA-Seq data

    R 243 28

  2. bambu-pipe bambu-pipe Public

    Transcript discovery and quantification for long read single cell and spatial transcriptomics data using Bambu

    Nextflow 21 1

  3. sg-nex-data sg-nex-data Public

    Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project

    R 158 27

  4. awesome-nanopore awesome-nanopore Public

    A curated list of awesome nanopore analysis tools.

    310 58

  5. m6anet m6anet Public

    Detection of m6A from direct RNA-Seq data

    Python 131 21

  6. xpore xpore Public

    Identification of differential RNA modifications from nanopore direct RNA sequencing

    Python 165 24

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