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frenkiboyclaude
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Remove eval=TRUE override in RNA-seq vignette chunk
This chunk had eval=TRUE which overrode the global eval=FALSE guard, causing pkgdown build to fail when DESeq2 is not available on CI. Co-Authored-By: Claude Opus 4.6 <[email protected]>
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vignettes/cacheR-rnaseq.Rmd

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@@ -147,8 +147,8 @@ counts1 <- cached_read_counts(counts_dir, sample_table)
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# Second run: same arguments and same files → uses cache
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```{r, eval=TRUE}
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counts2 <- cached_read_counts(counts_dir, sample_table)
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```{r}
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counts2 <- cached_read_counts(counts_dir, sample_table)
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identical(counts1, counts2)
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```

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